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cd-hit-est bioActor
Description
DNA sequence clustering.Inputs
| dnaSequenceFile | A dna sequence file in FASTA format. |
Outputs
| clusterFile | A cluster file indicating which sequences are clustered. |
Parameters
| outputPrefix | The prefix of output files. |
| seqIdCutoff | Clustering sequences with sequence identity > cutoff. |
| program | The command line program to execute. |
| checkOutputTimestamp | If true, verify the last modification timestamp for each output file has increased after execution. If the timestamp has not increased, throw an error. |
| additionalOptions | Additional command line options to run cd-hit-est |
| Choice | The execution choice to run. |