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cuffdiff bioActor


Differential analysis of two groups.


rerferenceGtfFileReference annotation file in GTF format.
group1Bam files of group 1.
group2Bam files of group 2.


isoformExpressionDiffFileIsoform expression differential analysis results.
geneExpressioDiffnFileGene expression differential analysis results.


programThe command line program to execute.
checkOutputTimestampIf true, verify the last modification timestamp for each output file has increased after execution. If the timestamp has not increased, throw an error.
additionalOptionsA parameter containing additional command line options.
ChoiceThe execution choice to run.